Investigation of statistical characteristics of GB-speckles, coding nucleotide sequences of the gene GPCR of Lumpy Skin Disease virus

O. V. Ulianova; I. A. Subbotina; N. N. Filonova; A. M. Lyapina; Yu. V. Saltykov; S. S. Zaytsev; S. S. Ulyanov; V. A. Feodorova

doi:10.1117/12.2522585

3 June 2019 Investigation of statistical characteristics of GB-speckles, coding nucleotide sequences of the gene GPCR of Lumpy Skin Disease virus

O. V. Ulianova, I. A. Subbotina, N. N. Filonova, A. M. Lyapina, Yu. V. Saltykov, S. S. Zaytsev, S. S. Ulyanov, V. A. Feodorova

Author Affiliations +

Proceedings Volume 11065, Saratov Fall Meeting 2018: Optical and Nano-Technologies for Biology and Medicine; 110650J (2019) https://doi.org/10.1117/12.2522585
Event: International Symposium on Optics and Biophotonics VI: Saratov Fall Meeting 2018, 2018, Saratov, Russian Federation

Abstract

For the first time gene-based speckles (GB-speckles) have been applied for analysis of nucleotide sequences of the gene GPCR of the Lumpy Skin Disease Virus (LSDV). The 1st and 2nd order statistics of the 2D speckle structures corresponding to nucleotide sequences of LSDV have been analyzed. It has been shown that these GB-speckles are forming in the case of small number of scatterers and they obey to non-gaussian statistics. It has been demonstrated that application of the GB-speckles, generated on the target virus nucleotide sequences has the great perspectives from viewpoint of modern bioinformatics.

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O. V. Ulianova, I. A. Subbotina, N. N. Filonova, A. M. Lyapina, Yu. V. Saltykov, S. S. Zaytsev, S. S. Ulyanov, and V. A. Feodorova "Investigation of statistical characteristics of GB-speckles, coding nucleotide sequences of the gene GPCR of Lumpy Skin Disease virus", Proc. SPIE 11065, Saratov Fall Meeting 2018: Optical and Nano-Technologies for Biology and Medicine, 110650J (3 June 2019); https://doi.org/10.1117/12.2522585

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