Journal of Biomedical Optics
VOL. 14 · NO. 6 | November 2009
CONTENTS
IN THIS ISSUE

JBO Letters
Journal of Biomedical Optics, Vol. 14, Issue 06, 060501, (November 2009) https://doi.org/10.1117/1.3257230
Open Access
TOPICS: Tissue optics, Infrared radiation, Nerve, Ocean optics, Electrodes, Laser tissue interaction, In vivo imaging, Laser induced damage, Laser damage threshold, Semiconductor lasers
Ching-Wei Chang, Mei Wu, Sofia Merajver M.D., Mary-Ann Mycek
Journal of Biomedical Optics, Vol. 14, Issue 06, 060502, (November 2009) https://doi.org/10.1117/1.3257254
Open Access
TOPICS: Fluorescence resonance energy transfer, Fluorescence lifetime imaging, Control systems, Luminescence, Molecular interactions, Microscopy, Resonance energy transfer, Proteins, Imaging systems, Breast cancer
Jiechen Yin, Gangjun Liu, Jun Zhang, Lingfeng Yu, Sari Mahon, David Mukai, Matthew Brenner M.D., Zhongping Chen
Journal of Biomedical Optics, Vol. 14, Issue 06, 060503, (November 2009) https://doi.org/10.1117/1.3268775
Open Access
TOPICS: Optical coherence tomography, 3D image processing, Injuries, Microelectromechanical systems, Cartilage, Reconstruction algorithms, 3D image reconstruction, In vivo imaging, Image processing, Image quality
Andrzej May, Srabani Bhaumik, Sanjiv Gambhir, Chun Zhan, Siavash Yazdanfar
Journal of Biomedical Optics, Vol. 14, Issue 06, 060504, (November 2009) https://doi.org/10.1117/1.3269675
Open Access
Szu-Yu Chen, Hai-Yin Wu, Chi-Kuang Sun
Journal of Biomedical Optics, Vol. 14, Issue 06, 060505, (November 2009) https://doi.org/10.1117/1.3269676
Open Access
TOPICS: Skin, In vivo imaging, Biopsy, Microscopy, Second-harmonic generation, Harmonic generation, Collagen, Tissues, Image resolution, Diagnostics
Yuuki Watanabe, Toshiki Itagaki
Journal of Biomedical Optics, Vol. 14, Issue 06, 060506, (November 2009) https://doi.org/10.1117/1.3275463
Open Access
TOPICS: Optical coherence tomography, Spectroscopy, Prisms, Image processing, Computing systems, Graphics processing units, Fourier transforms, CCD cameras, Computer programming, Imaging systems
Journal of Biomedical Optics, Vol. 14, Issue 06, 060507, (November 2009) https://doi.org/10.1117/1.3275464
Open Access
TOPICS: Blood, Doppler tomography, Optical coherence tomography, Particles, Scattering, Doppler effect, Glasses, In vivo imaging, Blood circulation, Pathology
Research Papers
Jerome Boutet, Lionel Hervé, Mathieu Debourdeau, Laurent Guyon, Philippe Peltie, Jean-Marc Dinten, Laurent Saroul, Francois Duboeuf, Didier Vray
Journal of Biomedical Optics, Vol. 14, Issue 06, 064001, (November 2009) https://doi.org/10.1117/1.3257236
Open Access
TOPICS: Luminescence, Ultrasonography, Prostate, Tissues, Prostate cancer, Signal detection, Tumors, Sensors, Absorption, Capillaries
Yao Sun, Eric Sobel, Huabei Jiang
Journal of Biomedical Optics, Vol. 14, Issue 06, 064002, (November 2009) https://doi.org/10.1117/1.3257246
Open Access
TOPICS: Absorption, In vivo imaging, Acquisition tracking and pointing, Arteries, 3D image processing, Photoacoustic tomography, Transducers, Acoustics, Spherical lenses, Photoacoustic spectroscopy
Journal of Biomedical Optics, Vol. 14, Issue 06, 064003, (November 2009) https://doi.org/10.1117/1.3259360
Open Access
TOPICS: Image restoration, Absorption, Optical properties, Optical tomography, Image compression, Reconstruction algorithms, Scattering, Tomography, Sensors, Tissues
Weirong Mo, Tyrphena Chan, Ling Chen, Nanguang Chen
Journal of Biomedical Optics, Vol. 14, Issue 06, 064004, (November 2009) https://doi.org/10.1117/1.3257251
Open Access
TOPICS: Breast, Tissue optics, Tissues, Optical properties, Optical fibers, In vivo imaging, Biomedical optics, Time resolved spectroscopy, Molybdenum, Absorption
Yixuan Li, Jürgen Schnekenburger, Michel Duits
Journal of Biomedical Optics, Vol. 14, Issue 06, 064005, (November 2009) https://doi.org/10.1117/1.3257253
Open Access
TOPICS: Particles, Tumors, Atomic force microscopy, Cancer, Breast, Lithium, Pancreas, Tissues, Breast cancer, Cytoskeletons
Journal of Biomedical Optics, Vol. 14, Issue 06, 064006, (November 2009) https://doi.org/10.1117/1.3262521
Open Access
TOPICS: Photodynamic therapy, Blood vessels, Digital Light Processing, Content addressable memory, Arteries, Veins, Photosensitizer targeting, Luminescence, In vivo imaging, Confocal microscopy
Journal of Biomedical Optics, Vol. 14, Issue 06, 064007, (November 2009) https://doi.org/10.1117/1.3259361
Open Access
TOPICS: Tomography, Transducers, 3D image processing, Imaging systems, Opacity, Visualization, Video, Veins, Tissue optics, Kidney
Journal of Biomedical Optics, Vol. 14, Issue 06, 064008, (November 2009) https://doi.org/10.1117/1.3258669
Open Access
TOPICS: Eye, Oxygen, Scattering, Eye models, Optical properties, Reflectivity, Blood, Oximetry, Retina, Absorption
C. Y. Fu, Beng-Koon Ng, Sirajudeen Gulam Razul
Journal of Biomedical Optics, Vol. 14, Issue 06, 064009, (November 2009) https://doi.org/10.1117/1.3258835
Open Access
TOPICS: Luminescence, Photon counting, Expectation maximization algorithms, Computer simulations, Deconvolution, Monte Carlo methods, Biological research, Statistical analysis, Data modeling, Electronics engineering
Xiaofeng Zhang, Cristian Badea, G. Allan Johnson
Journal of Biomedical Optics, Vol. 14, Issue 06, 064010, (November 2009) https://doi.org/10.1117/1.3258836
Open Access
TOPICS: Luminescence, Reconstruction algorithms, Data acquisition, Fluorescence tomography, Cameras, Image restoration, Chest, 3D image reconstruction, 3D image processing, Sensors
Journal of Biomedical Optics, Vol. 14, Issue 06, 064011, (November 2009) https://doi.org/10.1117/1.3258838
Open Access
TOPICS: In vivo imaging, Luminescence, In vitro testing, Optical filters, Tissues, Image resolution, Spectral resolution, Image filtering, Tissue optics, Composites
George Themelis, Jung Sun Yoo, Kwangsup Soh, Ralf Schulz, Vasilis Ntziachristos
Journal of Biomedical Optics, Vol. 14, Issue 06, 064012, (November 2009) https://doi.org/10.1117/1.3259362
Open Access
TOPICS: Luminescence, Imaging systems, Tissues, Signal attenuation, Absorption, Optical properties, Contrast transfer function, Lymphatic system, Cameras, Video
Christine Mulvey, Carly Sherwood, Irving Bigio
Journal of Biomedical Optics, Vol. 14, Issue 06, 064013, (November 2009) https://doi.org/10.1117/1.3259363
Open Access
TOPICS: Cell death, Scattering, Particles, Backscatter, Mie scattering, Light scattering, Scatter measurement, Cancer, Spectroscopy, Tissues
Rahul Sheth, Lee Josephson, Umar Mahmood M.D.
Journal of Biomedical Optics, Vol. 14, Issue 06, 064014, (November 2009) https://doi.org/10.1117/1.3259364
Open Access
TOPICS: Glucose, Tumors, Luminescence, Analog electronics, Imaging systems, Tissues, Molecules, Brain, Microscopy, Multispectral imaging
Silvia Murialdo, Gonzalo Sendra, Lucia Passoni, Ricardo Arizaga, Jorge Gonzalez, Héctor Rabal, Marcelo Trivi
Journal of Biomedical Optics, Vol. 14, Issue 06, 064015, (November 2009) https://doi.org/10.1117/1.3262608
Open Access
TOPICS: Speckle, Bacteria, Biological research, Image processing, Lanthanum, Signal processing, Microorganisms, Cameras, Contamination, Optical coherence tomography
Galia Norman M.D., Yaron Rabi, Ehud Assia M.D., Abraham Katzir
Journal of Biomedical Optics, Vol. 14, Issue 06, 064016, (November 2009) https://doi.org/10.1117/1.3262610
Open Access
TOPICS: Laser welding, Laser tissue interaction, Laser bonding, Tissues, In vitro testing, Mercury, Eye, Laser systems engineering, Solids, Radiometry
Yiwen Sun, Bernd Fischer, Emma Pickwell-MacPherson
Journal of Biomedical Optics, Vol. 14, Issue 06, 064017, (November 2009) https://doi.org/10.1117/1.3268439
Open Access
TOPICS: Tissues, Terahertz radiation, Refractive index, Absorption, Water, Quartz, Spectroscopy, Sun, Imaging spectroscopy, Reflectance spectroscopy
Journal of Biomedical Optics, Vol. 14, Issue 06, 064018, (November 2009) https://doi.org/10.1117/1.3268440
Open Access
TOPICS: Multiphoton fluorescence microscopy, Luminescence, Microscopy, Multiphoton microscopy, Pulsed laser operation, Absorption, Modulation, Ultrafast phenomena, Signal detection, Laser applications
Chris Drew, Thomas Milner, Christopher Rylander
Journal of Biomedical Optics, Vol. 14, Issue 06, 064019, (November 2009) https://doi.org/10.1117/1.3268441
Open Access
TOPICS: Skin, Optical coherence tomography, Tissue optics, Water, Tissues, Light scattering, Refractive index, Scattering, Optical clearing, In vivo imaging
Journal of Biomedical Optics, Vol. 14, Issue 06, 064020, (November 2009) https://doi.org/10.1117/1.3268442
Open Access
TOPICS: Optical coherence tomography, GRIN lenses, In vivo imaging, Tissues, Head, Imaging systems, Cancer, Biopsy, Mirrors, Light sources
Y. C. Lim, Katrina Altman, David Farson, Katharine Flores
Journal of Biomedical Optics, Vol. 14, Issue 06, 064021, (November 2009) https://doi.org/10.1117/1.3268444
Open Access
TOPICS: Laser ablation, Bone, Femtosecond phenomena, Laser damage threshold, Tissues, Pulsed laser operation, Natural surfaces, Gaussian beams, Scanning electron microscopy, Roads
Homanaz Ghafari, Yanzhou Zhou, Selman Ali, Quentin Hanley
Journal of Biomedical Optics, Vol. 14, Issue 06, 064022, (November 2009) https://doi.org/10.1117/1.3268772
Open Access
TOPICS: Confocal microscopy, Thin films, Microscopes, Glasses, Luminescence, Systems modeling, Point spread functions, Solids, Scanners, Signal to noise ratio
Delia Cabrera DeBuc, Gabor Somfai M.D., Sudarshan Ranganathan, Erika Tatrai, Mária Ferencz, Carmen Puliafito M.D.
Journal of Biomedical Optics, Vol. 14, Issue 06, 064023, (November 2009) https://doi.org/10.1117/1.3268773
Open Access
TOPICS: Optical coherence tomography, Retina, Image segmentation, Reliability, Image analysis, Error analysis, Algorithm development, Visualization, Eye, Macula
Matija Milanic, Boris Majaron
Journal of Biomedical Optics, Vol. 14, Issue 06, 064024, (November 2009) https://doi.org/10.1117/1.3275465
Open Access
TOPICS: Profiling, Collagen, Optical filters, Tissue optics, Skin, Thermography, Absorption, Tissues, Infrared radiation, Signal to noise ratio
Shinji Umeyama, Toru Yamada
Journal of Biomedical Optics, Vol. 14, Issue 06, 064025, (November 2009) https://doi.org/10.1117/1.3275466
Open Access
TOPICS: Monte Carlo methods, Near infrared spectroscopy, Absorption, Hemodynamics, Sensors, Scattering, Error analysis, Skull, Absorbance, Matrices
Irene Ventrillard-Courtillot, Thierry Gonthiez, Christine Clerici, Daniele Romanini
Journal of Biomedical Optics, Vol. 14, Issue 06, 064026, (November 2009) https://doi.org/10.1117/1.3269677
Open Access
TOPICS: Carbon monoxide, Gas lasers, Spectroscopy, Absorption, Absorption spectroscopy, Calibration, Laser spectroscopy, Biological research, Statistical analysis, Methane
Journal of Biomedical Optics, Vol. 14, Issue 06, 064027, (November 2009) https://doi.org/10.1117/1.3269678
Open Access
TOPICS: Particles, Spherical lenses, Plasmonics, Proteins, Adsorption, Nanoparticles, Biosensing, Scattering, Scanning electron microscopy, Biosensors
Pierre Lane, Calum MacAulay
Journal of Biomedical Optics, Vol. 14, Issue 06, 064028, (November 2009) https://doi.org/10.1117/1.3269679
Open Access
TOPICS: Backscatter, Optical fibers, Reflectivity, Refractive index, Fiber optics, Tissues, Rayleigh scattering, Confocal microscopy, Signal attenuation, Image transmission
Journal of Biomedical Optics, Vol. 14, Issue 06, 064029, (November 2009) https://doi.org/10.1117/1.3275850
Open Access
TOPICS: Surgery, LASIK, Eye, Cornea, Interferometry, Linear filtering, Shearing interferometers, Wavefronts, Laser vision correction, Laser therapeutics
Journal of Biomedical Optics, Vol. 14, Issue 06, 064030, (November 2009) https://doi.org/10.1117/1.3269680
Open Access
TOPICS: Tissues, Spectroscopy, Spectral resolution, Tissue optics, Optical spectroscopy, Optical coherence tomography, Light scattering, Statistical analysis, Spectral data processing, Biomedical optics
Hongchun Bao, Alex Boussioutas, Jeremy Reynolds, Sarah Russell, Min Gu
Journal of Biomedical Optics, Vol. 14, Issue 06, 064031, (November 2009) https://doi.org/10.1117/1.3269681
Open Access
TOPICS: Luminescence, Intestine, Endomicroscopy, Cancer, Stomach, Stereoscopy, Diagnostics, In vivo imaging, Imaging systems, Image resolution
Elisabeth Papazoglou, Michael Neidrauer, Leonid Zubkov, Michael Weingarten M.D., Kambiz Pourrezaei
Journal of Biomedical Optics, Vol. 14, Issue 06, 064032, (November 2009) https://doi.org/10.1117/1.3275467
Open Access
TOPICS: Wound healing, Diabetic foot ulcers, Tissue optics, Absorption, Diffuse photon density waves, Near infrared, Skin, Digital photography, Optical fibers, Oxygen
Bradley Losavio, Vijay Iyer, Peter Saggau
Journal of Biomedical Optics, Vol. 14, Issue 06, 064033, (November 2009) https://doi.org/10.1117/1.3275468
Open Access
TOPICS: Dispersion, Neurons, Photolysis, Microscopes, Spine, Diffraction, Brain, Diffraction gratings, Neurotransmitters, Objectives
Toru Yamada, Shinji Umeyama, Keiji Matsuda
Journal of Biomedical Optics, Vol. 14, Issue 06, 064034, (November 2009) https://doi.org/10.1117/1.3275469
Open Access
TOPICS: Sensors, Absorption, Hemodynamics, Signal attenuation, Scattering, Near infrared spectroscopy, Monte Carlo methods, Skull, Signal detection, Head
Qin Miao, J. Richard Rahn, Anna Tourovskaia, Michael Meyer, Thomas Neumann M.D., Alan Nelson, Eric Seibel
Journal of Biomedical Optics, Vol. 14, Issue 06, 064035, (November 2009) https://doi.org/10.1117/1.3275470
Open Access
TOPICS: 3D image processing, Luminescence, Absorption, Image resolution, Microscopes, Tomography, Projection systems, Optical tomography, Microscopy, 3D image reconstruction
Dmitry Strokotov, Maxim Yurkin, Konstantin Gilev, Dirk Van Bockstaele, Alfons Hoekstra, Nikolay Rubtsov, Valerii Maltsev
Journal of Biomedical Optics, Vol. 14, Issue 06, 064036, (November 2009) https://doi.org/10.1117/1.3275471
Open Access
TOPICS: Error analysis, Refractive index, Statistical analysis, Optical spheres, Scattering, Particles, Optimization (mathematics), Light scattering, Blood, Mie scattering
Sven Meissner, Lilla Knels, Edmund Koch
Journal of Biomedical Optics, Vol. 14, Issue 06, 064037, (November 2009) https://doi.org/10.1117/1.3275472
Open Access
TOPICS: Lung, Optical coherence tomography, Bioalcohols, 3D image processing, Tissues, Interfaces, Image segmentation, 3D modeling, Video, 3D acquisition
Sylvain Gioux, Ashitate Yoshitomo M.D., Merlijn Hutteman, John Frangioni M.D.
Journal of Biomedical Optics, Vol. 14, Issue 06, 064038, (November 2009) https://doi.org/10.1117/1.3275473
Open Access
TOPICS: Luminescence, Near infrared, In vivo imaging, Optical imaging, Cameras, Signal detection, Image acquisition, Heart, Video, Electrocardiography
Dorota Szczesna, D. Robert Iskander
Journal of Biomedical Optics, Vol. 14, Issue 06, 064039, (November 2009) https://doi.org/10.1117/1.3275474
Open Access
TOPICS: Eye, Interferometry, Image quality, Image processing, Biological research, Motion estimation, Wavefronts, Cornea, Physics, Roads
Philipp Steven, Maya Müller M.D., Norbert Koop, Christian Rose M.D., Gereon Hüttmann
Journal of Biomedical Optics, Vol. 14, Issue 06, 064040, (November 2009) https://doi.org/10.1117/1.3275475
Open Access
TOPICS: Tissues, Cornea, Confocal microscopy, Luminescence, Pathology, Fluorescence lifetime imaging, Second-harmonic generation, In vivo imaging, Multiphoton microscopy, Natural surfaces
Anuj Sharma, Rajan Jha, Himansu Pattanaik, Gerhard Mohr
Journal of Biomedical Optics, Vol. 14, Issue 06, 064041, (November 2009) https://doi.org/10.1117/1.3275476
Open Access
TOPICS: Blood, Sensors, Fiber optics sensors, Silver, Fiber optics, Refractive index, Optical fibers, Surface plasmons, Reflection, Sensor performance
Kong-Thon Tsen, Shaw-Wei Tsen, Qiang Fu, Stuart Lindsay, Karen Kibler, Bert Jacobs, Tzyy Choou Wu M.D., Balasubramanyam Karanam, Subhashini Jagu, Richard Roden, Chien-Fu Hung, Otto Sankey, B. Ramakrishna, Juliann Kiang
Journal of Biomedical Optics, Vol. 14, Issue 06, 064042, (November 2009) https://doi.org/10.1117/1.3275477
Open Access
TOPICS: Viruses, Laser irradiation, Particles, Fiber lasers, Blood, Atomic force microscopy, Proteins, Pulsed laser operation, Pathogens, Ultraviolet radiation
Kazuya Aizawa, Shunichi Sato, Mitsuhiro Terakawa, Daizoh Saitoh, Hitoshi Tsuda, Hiroshi Ashida, Minoru Obara
Journal of Biomedical Optics, Vol. 14, Issue 06, 064043, (November 2009) https://doi.org/10.1117/1.3253325
Open Access
TOPICS: Skin, Tissues, Transplantation, Wound healing, Blood circulation, Doppler effect, Proteins, Defense and security, Laser tissue interaction, Imaging systems
Doris Helbig M.D., Marc Bodendorf M.D., Sonja Grunewald M.D., Michael Kendler M.D., Jan Simon M.D., Uwe Paasch M.D.
Journal of Biomedical Optics, Vol. 14, Issue 06, 064044, (November 2009) https://doi.org/10.1117/1.3275479
Open Access
TOPICS: Skin, Wound healing, Collagen, Carbon monoxide, Proteins, Laser therapeutics, Gas lasers, Blood vessels, Semiconductor lasers, Laser marking
Tuqiang Xie, Gangjun Liu, Kelly Kreuter, Sari Mahon, Henri Colt, David Mukai, George Peavy D.V.M., Zhongping Chen, Matthew Brenner M.D.
Journal of Biomedical Optics, Vol. 14, Issue 06, 064045, (November 2009) https://doi.org/10.1117/1.3275478
Open Access
TOPICS: Optical coherence tomography, Tumors, In vivo imaging, Imaging systems, 3D image processing, Endoscopy, Chest, Tissues, GRIN lenses, Lung
Rob van der Veen M.D., Tos Berendschot, Maria Makridaki, Fred Hendrikse M.D., David Carden, Ian Murray
Journal of Biomedical Optics, Vol. 14, Issue 06, 064046, (November 2009) https://doi.org/10.1117/1.3275481
Open Access
TOPICS: Reflectometry, Absorbance, Data modeling, Reflectivity, Eye, Solids, Photometry, Optical fibers, Retina, Target detection
Christian Zakian, Iain Pretty, Roger Ellwood
Journal of Biomedical Optics, Vol. 14, Issue 06, 064047, (November 2009) https://doi.org/10.1117/1.3275480
Open Access
TOPICS: Teeth, Dental caries, Near infrared, Reflectivity, Absorption, Hyperspectral imaging, Light scattering, Imaging spectroscopy, Luminescence, Scattering
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