Free software tools for atlas-based volumetric neuroimage analysis

Pierre-Louis Bazin; Dzung L. Pham; William Gandler; Matthew McAuliffe

doi:10.1117/12.595602

29 April 2005 Free software tools for atlas-based volumetric neuroimage analysis

Pierre-Louis Bazin, Dzung L. Pham, William Gandler, Matthew McAuliffe

Proceedings Volume 5747, Medical Imaging 2005: Image Processing; (2005) https://doi.org/10.1117/12.595602
Event: Medical Imaging, 2005, San Diego, California, United States

Abstract

We describe new and freely available software tools for measuring volumes in subregions of the brain. The method is fast, flexible, and employs well-studied techniques based on the Talairach-Tournoux atlas. The software tools are released as plug-ins for MIPAV, a freely available and user-friendly image analysis software package developed by the National Institutes of Health. Our software tools include a digital Talairach atlas that consists of labels for 148 different substructures of the brain at various scales.

Citation Download Citation

Pierre-Louis Bazin, Dzung L. Pham, William Gandler, and Matthew McAuliffe "Free software tools for atlas-based volumetric neuroimage analysis", Proc. SPIE 5747, Medical Imaging 2005: Image Processing, (29 April 2005); https://doi.org/10.1117/12.595602

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