Temporally rich hyperspectral time-series can provide unique time critical information on within-field variations in vegetation health and distribution needed by farmers to effectively optimize crop production. In this study, a dense timeseries of images were acquired from the Earth Observing-1 (EO-1) Hyperion sensor over an intensive farming area in the center of Saudi Arabia. After correction for atmospheric effects, optimal links between carefully selected explanatory hyperspectral vegetation indices and target vegetation characteristics were established using a machine learning approach. A dataset of in-situ measured leaf chlorophyll (Chll) and leaf area index (LAI), collected during five intensive field campaigns over a variety of crop types, were used to train the rule-based predictive models. The ability of the narrow-band hyperspectral reflectance information to robustly assess and discriminate dynamics in foliar biochemistry and biomass through empirical relationships were investigated. This also involved evaluations of the generalization and reproducibility of the predictions beyond the conditions of the training dataset. The very high temporal resolution of the satellite retrievals constituted a specifically intriguing feature that facilitated detection of total canopy Chl and LAI dynamics down to sub-weekly intervals. The study advocates the benefits associated with the availability of optimum spectral and temporal resolution spaceborne observations for agricultural management purposes.
With global population projected to approach 9 billion by 2050, it has been estimated that a 40% increase in cereal production will be required to satisfy the worlds growing nutritional demands. Any such increases in agricultural productivity are likely to occur within a system that has limited room for growth and in a world with a climate that is different from that of today. Fundamental to achieving food and water security, is the capacity to monitor the health and condition of agricultural systems. While space-agency based satellites have provided the backbone for earth observation over the last few decades, many developments in the field of high-resolution earth observation have been advanced by the commercial sector. These advances relate not just to technological developments in the use of unmanned aerial vehicles (UAVs), but also the advent of nano-satellite constellations that offer a radical shift in the way earth observations are now being retrieved. Such technologies present opportunities for improving our description of the water, energy and carbon cycles. Efforts towards developing new observational techniques and interpretative frameworks are required to provide the tools and information needed to improve the management and security of agricultural and related sectors. These developments are one of the surest ways to better manage, protect and preserve national food and water resources. Here we review the capabilities of recently deployed satellite systems and UAVs and examine their potential for application in precision agriculture.
Hyperspectral remote sensing images are usually affected by atmospheric conditions such as clouds and their shadows, which represents a contamination of reflectance data and complicates the extraction of biophysical variables to monitor phenological cycles of crops. This paper explores a cloud removal approach based on reflectance prediction using multitemporal data and spatio-temporal statistical models. In particular, a covariance model that captures the behavior of spatial and temporal components in data simultaneously (i.e. non-separable) is considered. Eight weekly images collected from the Hyperion hyper-spectrometer instrument over an agricultural region of Saudi Arabia were used to reconstruct a scene with the presence of cloudy affected pixels over a center-pivot crop. A subset of reflectance values of cloud-free pixels from 50 bands in the spectral range from 426.82 to 884.7 nm at each date, were used as input to fit a parametric family of non-separable and stationary spatio-temporal covariance functions. Applying simple kriging as an interpolator, cloud affected pixels were replaced by cloud-free predicted values per band, obtaining their respective predicted spectral profiles at the same time. An exercise of reconstructing simulated cloudy pixels in a different swath was conducted to assess the model accuracy, achieving root mean square error (RMSE) values per band less than or equal to 3%. The spatial coherence of the results was also checked through absolute error distribution maps demonstrating their consistency.
Accurate retrieval of canopy biophysical and leaf biochemical constituents from space observations is critical to diagnosing the functioning and condition of vegetation canopies across spatio-temporal scales. Retrieved vegetation characteristics may serve as important inputs to precision farming applications and as constraints in spatially and temporally distributed model simulations of water and carbon exchange processes. However significant challenges remain in the translation of composite remote sensing signals into useful biochemical, physiological or structural quantities and treatment of confounding factors in spectrum-trait relations. Bands in the red-edge spectrum have particular potential for improving the robustness of retrieved vegetation properties. The development of observationally based vegetation retrieval capacities, effectively constrained by the enhanced information content afforded by bands in the red-edge, is a needed investment towards optimizing the benefit of current and future satellite sensor systems. In this study, a REGularized canopy reFLECtance model (REGFLEC) for joint leaf chlorophyll (Chll) and leaf area index (LAI) retrieval is extended to sensor systems with a band in the red-edge region for the first time. Application to time-series of 5 m resolution multi-spectral RapidEye data is demonstrated over an irrigated agricultural region in central Saudi Arabia, showcasing the value of satellite-derived crop information at this fine scale for precision management. Validation against in-situ measurements in fields of alfalfa, Rhodes grass, carrot and maize indicate improved accuracy of retrieved vegetation properties when exploiting red-edge information in the model inversion process.
In the last years, modeling of surface processes - such as water, energy and carbon budgets, as well as vegetation growth- seems to be focused on integrated approaches that combine aspects of hydrology, biology and meteorology into unified analyses. In this context, remotely sensed data often have a core role due to the cross-cutting impact of this novel source of spatially distributed information on all these research areas. However, several applications - such as drought monitoring, yield forecasting and crop management - require spatially detailed products at sub-field scales, which can be obtained only with support of adequately fine resolution remote sensing data (< 100 m). In particular, observations in the visible to the near infrared (VIS/NIR) spectral region can be used to derive biophysical and biochemical properties of the vegetation (i.e., leaf area index and leaf chlorophyll). Complementarily, the thermal infrared (TIR) signal provides valuable information about land surface temperature, which in turn represents an accurate proxy indicator of the subsurface moisture status by means of surface energy budget analysis. Additionally, the strong link between crop water stress and stomatal closure allows inference of crop carbon assimilation using the same tools. In this work, an integrated approach is proposed to model both carbon and water budgets at field scale by means of a joint use of a thermal-based Two Source Energy Budget (TSEB) model and an analytical, Light-Use-Efficiency (LUE) based model of canopy resistance. This suite of models allows integration of information retrieved by both fine and coarse resolution satellites by means of a data fusion procedure. A set of Landsat and MODIS images are used to investigate the suitability of this approach, and the modeled fluxes are compared with observations made by several flux towers in terms of both water and carbon fluxes.
This paper describes a novel physically-based approach for estimating leaf area index (LAI) and leaf chlorophyll content (Cab) at regional scales that relies on radiance data acquirable from a suite of aircraft and operational satellite sensors. The REGularized canopy reFLECtance (REGFLEC) modeling tool integrates leaf optics (PROSPECT), canopy reflectance (ACRM), and atmospheric radiative transfer (6SV1) model components, facilitating the direct use of at-sensor radiances in green, red and near-infrared wavelengths. REGFLEC adopts a multi-step LUT-based inversion approach and incorporates image-based techniques to reduce the confounding effects of land cover specific vegetation parameters and soil reflectance. REGFLEC was applied to agricultural and natural vegetation areas using 10 m and 20 m resolution SPOT imagery, and variable environmental and plant development conditions allowed for model validation over a wide range in LAI (0 - 6) and Cab (20 - 75 µg cm-2). Validation against in-situ measurements yielded relative root-mean-square deviations on the order of 13% (0.4) for LAI and between 11 - 19% (4.9 - 9.1 µg cm-2) for Cab. REGFLEC demonstrated good utility in detecting spatial and temporal variations in LAI and Cab without requiring site-specific data for calibration. The physical approach presented here can quite easily be applied to other regions and has the potential of being more universally applicable than traditional empirical approaches for retrieving LAI and Cab.
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